BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027B10SP1|AL428678
(882 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1530 1395 0.0
3x_Contig76 258 1e-68
3x_Contig1461 119 9e-27
>3x_Contig1530
Length = 6216
Score = 1395 bits (703), Expect = 0.0
Identities = 834/876 (95%), Gaps = 2/876 (0%)
Strand = Plus / Minus
Query: 1 gatcctcgccacacgggattctcaccctctatgacgtcctgttccaaggaacatagacaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2307 gatcctcgccacacgggattctcaccctctatgacgtcctgttccaaggaacatagacaa 2248
Query: 61 ggaccagctacaaagttgccttcttcaaattacaactcggacgtcgaagvcncagatttc 120
||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct: 2247 ggaccagctacaaagttgccttcttcaaattacaactcggacgtcgaagacgcagatttc 2188
Query: 121 aaatttgagcttttgccgcttcactcgccgttactaaggcaatcccggttggtttctttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2187 aaatttgagcttttgccgcttcactcgccgttactaaggcaatcccggttggtttctttt 2128
Query: 181 cctccgcttattgatatgcttaagttcagcgggtattcctacctgatttgaggtcaaact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2127 cctccgcttattgatatgcttaagttcagcgggtattcctacctgatttgaggtcaaact 2068
Query: 241 ttgagagttttgattaagccgtatgcctcaaggagacaaacaccagcgagtctttataac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2067 ttgagagttttgattaagccgtatgcctcaaggagacaaacaccagcgagtctttataac 2008
Query: 301 acctataagctcattgaccctagcttaccacgaattggcgcaaacctaagacgtagatgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2007 acctataagctcattgaccctagcttaccacgaattggcgcaaacctaagacgtagatgt 1948
Query: 361 gcaagagtcgagtccatagacttgacacgcagccctgctcacgcagaaggcaacggctag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1947 gcaagagtcgagtccatagacttgacacgcagccctgctcacgcagaaggcaacggctag 1888
Query: 421 ccactttcaagttaacccgaaaaacgagtatcactcactaccaaacccaaaggtttgaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1887 ccactttcaagttaacccgaaaaacgagtatcactcactaccaaacccaaaggtttgaga 1828
Query: 481 gagaaatgacgctcaaacaggcatg-ccccctggaataccagagggcgcaatgtgcgttc 539
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1827 gagaaatgacgctcaaacaggcatgcccccctggaataccagagggcgcaatgtgcgttc 1768
Query: 540 aaagatttgatgattcacgaaaatctgcaattcacaatacatatcgcaattcgctgcgtt 599
||||||||||||||| | |||||| || |||| | |||| |||| |||||| | || |||
Sbjct: 1767 aaagatttgatgatttaagaaaatatgaaattaaaaataaatatagcaattaggtgggtt 1708
Query: 600 cttcatcgatgcgagaaccaagagatccgttgttgaaagttttgaatattaaatttcttg 659
|| || |||||||||| ||||||| |||||||||||||||||||||||||||| |||
Sbjct: 1707 atttatagatgcgagaaaaaagagataagttgttgaaagttttgaatattaaatttattg 1648
Query: 660 ataaatagtttttcataatgcaaaatgttgtttgtgtttatgtccactggagagacgagc 719
||||||||||||| ||||||||||||||||||||||||||||| |||||||||| ||||
Sbjct: 1647 ataaatagtttttgataatgcaaaatgttgtttgtgtttatgttaactggagagaagagc 1588
Query: 720 tctccagggaagtagttcatagagaaaaaactccattgtgtttaggatgagagaaagaaa 779
| | |||||||||||| |||||||||||| | ||||||||||||||||||||||||||
Sbjct: 1587 tttttagggaagtagtttatagagaaaaaaatttattgtgtttaggatgagagaaagaaa 1528
Query: 780 actgatagcagaaaatcaagaattagccgcgcaattaagcgcaggccatattcagcgatt 839
| |||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 1527 attgatagcagaaaattaagaattagccgcgcaattaagcgcaggcgatatttagcgatt 1468
Query: 840 -ccccagtaatctactcattcataatctttaatgat 874
|||||||||| |||| ||| ||||| |||||||||
Sbjct: 1467 cccccagtaatttacttatttataatatttaatgat 1432
>3x_Contig76
Length = 894
Score = 258 bits (130), Expect = 1e-68
Identities = 552/691 (79%), Gaps = 2/691 (0%)
Strand = Plus / Minus
Query: 18 attctcaccctctatgacgtcctgttccaaggaacatagacaaggaccagctacaaagtt 77
||||||||||||||| || |||| |||||| |||||| |||| |||| ||||||| ||
Sbjct: 704 attctcaccctctattacttccttttccaattaacatatacaattaccatctacaaattt 645
Query: 78 gccttcttcaaattacaactcggacgtcgaagvcnc-agatttcaaatttgagcttttgc 136
|||||||||||||||||||| || || || | | | ||||||||||| | ||||| |
Sbjct: 644 tccttcttcaaattacaactcttacttctaatactccatatttcaaattttatctttttc 585
Query: 137 cgcttcactcgccgttactaaggcaatcccggttggtttcttttcctccgcttattgata 196
| |||||||| || ||||||| ||||||| || ||||||||||||| |||||| |||
Sbjct: 584 ctcttcactctcctttactaattcaatccctttttttttcttttcctcctcttatttata 525
Query: 197 tgcttaagttcagcgggtattcctacctgatttgaggtcaaactttgagagttttgatta 256
| ||||| |||| | ||||||||||| |||| | ||||||||| | | |||| ||||
Sbjct: 524 ttcttaatttcatcttttattcctaccttattttatttcaaacttttatattttttatta 465
Query: 257 agccgtatgcctcaaggagacaaacaccagcgagtctttataacacctataagctcattg 316
| || ||| |||||| | |||||||||| | | |||||||||||||||||| ||||||
Sbjct: 464 atccttattcctcaattatacaaacaccatctattctttataacacctataatctcattt 405
Query: 317 accctagcttaccacgaattggcgcaaacctaagacgtagatgtgcaagagtcgagtcca 376
|||||| |||||||| |||| | ||||||||| || || || | ||| | || | ||||
Sbjct: 404 accctatcttaccactaattttctcaaacctaatacttatattttcaatattctattcca 345
Query: 377 tagacttgacacgcagccctgctcacgcagaaggcaacggctagccactttcaagttaac 436
|| |||| |||| || |||| |||| || || |||| ||| |||||||||| |||||
Sbjct: 344 tatactttacactcatccctt-tcactcataattcaacttctatccactttcaatttaac 286
Query: 437 ccgaaaaacgagtatcactcactaccaaacccaaaggtttgagagagaaatgacgctcaa 496
|| |||||| | ||||||||||||||||||||||| ||| | | | |||| || |||||
Sbjct: 285 cctaaaaactattatcactcactaccaaacccaaattttttatatataaattactctcaa 226
Query: 497 acaggcatgccccctggaataccagagggcgcaatgtgcgttcaaagatttgatgattca 556
||| ||| |||||| ||||||| | | |||| | | |||||| |||| || |||||
Sbjct: 225 acattcattccccctttaataccatatttctcaattttctttcaaatattttattattca 166
Query: 557 cgaaaatctgcaattcacaatacatatcgcaattcgctgcgttcttcatcgatgcgagaa 616
| ||||||| |||||||||||||||||| |||||| || | ||||||||| || | | ||
Sbjct: 165 ctaaaatcttcaattcacaatacatatctcaattctcttctttcttcatctattctataa 106
Query: 617 ccaagagatccgttgttgaaagttttgaatattaaatttcttgataaatagtttttcata 676
|||| | |||| || || ||| |||| ||||||||||||||| ||||||| |||||||||
Sbjct: 105 ccaatatatcctttttttaaattttttaatattaaatttctttataaatattttttcata 46
Query: 677 atgcaaaatgttgtttgtgtttatgtccact 707
|| |||||| || ||| | ||||| ||||||
Sbjct: 45 attcaaaattttttttttttttatttccact 15
>3x_Contig1461
Length = 5478
Score = 119 bits (60), Expect = 9e-27
Identities = 67/68 (98%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 777 aaaactgat-agcagaaaatcaagaattagccgcgcaattaagcgcaggccatattcagc 835
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 aaaactgattagcagaaaatcaagaattagccgcgcaattaagcgcaggccatattcagc 208
Query: 836 gattcccc 843
||||||||
Sbjct: 209 gattcccc 216
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5777
Number of Sequences: 1807
Number of extensions: 5777
Number of successful extensions: 43
Number of sequences better than 1.0e-20: 3
length of query: 882
length of database: 10,358,551
effective HSP length: 16
effective length of query: 866
effective length of database: 10,329,639
effective search space: 8945467374
effective search space used: 8945467374
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)